PoplarV1, Main, Exploration, bibRecord, 002B34

Development of 35 microsatellite markers from heat stress transcription factors in Populus simonii (Salicaceae).

Identifieur interne : 002B34 ( Main/Exploration ); précédent : 002B33; suivant : 002B35

Development of 35 microsatellite markers from heat stress transcription factors in Populus simonii (Salicaceae).

Auteurs : Lu Wang [République populaire de Chine] ; Bao-Lei Wang ; Zun-Zheng Wei ; Qing-Zhang Du ; De-Qiang Zhang ; Bai-Lian Li

Source :

American journal of botany [ 1537-2197 ] ; 2012.

RBID : pubmed:22933359

Descripteurs français

English descriptors

KwdEn :
- DNA-Binding Proteins (genetics), Genetic Loci (genetics), Genetic Variation (MeSH), Heat Shock Transcription Factors (MeSH), Heat-Shock Proteins (genetics), Microsatellite Repeats (genetics), Molecular Sequence Data (MeSH), Plant Proteins (genetics), Populus (genetics), Transcription Factors (genetics).
MESH :
- chemical , genetics : DNA-Binding Proteins, Heat-Shock Proteins, Plant Proteins, Transcription Factors.
- genetics : Genetic Loci, Microsatellite Repeats, Populus.
- Genetic Variation, Heat Shock Transcription Factors, Molecular Sequence Data.

Abstract

PREMISE OF THE STUDY

Microsatellite markers within regulators of heat stress transcription factors were identified in the Populus trichocarpa genome, and then developed for P. simonii to investigate the genetic diversity of germplasm resources and to further identify favorable alleles significantly associated with stress-resistant traits.

METHODS AND RESULTS

Thirty-five novel microsatellite markers were identified from genes controlling heat stress transcription factors in P. simonii using a Sanger sequencing protocol. Polymorphisms in 48 individuals from 16 populations of P. simonii revealed that the number of alleles per locus ranged from two to nine with an average of 4.6; the observed heterozygosity and expected heterozygosity per locus varied from 0.143 to 0.857 and from 0.257 to 0.948, respectively.

CONCLUSIONS

The new polymorphic markers developed during this study will facilitate the construction of genetic linkage maps and will aid in marker-assisted breeding of a new germplasm with desirable abiotic stress resistance in Populus species.

DOI: 10.3732/ajb.1200056
PubMed: 22933359

Affiliations:

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Le document en format XML

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<author><name sortKey="Wang, Lu" sort="Wang, Lu" uniqKey="Wang L" first="Lu" last="Wang">Lu Wang</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China.</nlm:affiliation>
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<author><name sortKey="Wang, Bao Lei" sort="Wang, Bao Lei" uniqKey="Wang B" first="Bao-Lei" last="Wang">Bao-Lei Wang</name>
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<author><name sortKey="Wei, Zun Zheng" sort="Wei, Zun Zheng" uniqKey="Wei Z" first="Zun-Zheng" last="Wei">Zun-Zheng Wei</name>
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<author><name sortKey="Du, Qing Zhang" sort="Du, Qing Zhang" uniqKey="Du Q" first="Qing-Zhang" last="Du">Qing-Zhang Du</name>
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<author><name sortKey="Zhang, De Qiang" sort="Zhang, De Qiang" uniqKey="Zhang D" first="De-Qiang" last="Zhang">De-Qiang Zhang</name>
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<author><name sortKey="Wang, Bao Lei" sort="Wang, Bao Lei" uniqKey="Wang B" first="Bao-Lei" last="Wang">Bao-Lei Wang</name>
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<author><name sortKey="Wei, Zun Zheng" sort="Wei, Zun Zheng" uniqKey="Wei Z" first="Zun-Zheng" last="Wei">Zun-Zheng Wei</name>
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<author><name sortKey="Du, Qing Zhang" sort="Du, Qing Zhang" uniqKey="Du Q" first="Qing-Zhang" last="Du">Qing-Zhang Du</name>
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<author><name sortKey="Zhang, De Qiang" sort="Zhang, De Qiang" uniqKey="Zhang D" first="De-Qiang" last="Zhang">De-Qiang Zhang</name>
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<series><title level="j">American journal of botany</title>
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<term>Genetic Loci (genetics)</term>
<term>Genetic Variation (MeSH)</term>
<term>Heat Shock Transcription Factors (MeSH)</term>
<term>Heat-Shock Proteins (genetics)</term>
<term>Microsatellite Repeats (genetics)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Plant Proteins (genetics)</term>
<term>Populus (genetics)</term>
<term>Transcription Factors (genetics)</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>Données de séquences moléculaires (MeSH)</term>
<term>Facteurs de transcription (génétique)</term>
<term>Facteurs de transcription de choc thermique (MeSH)</term>
<term>Locus génétiques (génétique)</term>
<term>Populus (génétique)</term>
<term>Protéines de liaison à l'ADN (génétique)</term>
<term>Protéines du choc thermique (génétique)</term>
<term>Protéines végétales (génétique)</term>
<term>Répétitions microsatellites (génétique)</term>
<term>Variation génétique (MeSH)</term>
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<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA-Binding Proteins</term>
<term>Heat-Shock Proteins</term>
<term>Plant Proteins</term>
<term>Transcription Factors</term>
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<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genetic Loci</term>
<term>Microsatellite Repeats</term>
<term>Populus</term>
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<term>Protéines de liaison à l'ADN</term>
<term>Protéines du choc thermique</term>
<term>Protéines végétales</term>
<term>Répétitions microsatellites</term>
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<keywords scheme="MESH" xml:lang="en"><term>Genetic Variation</term>
<term>Heat Shock Transcription Factors</term>
<term>Molecular Sequence Data</term>
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<keywords scheme="MESH" xml:lang="fr"><term>Données de séquences moléculaires</term>
<term>Facteurs de transcription de choc thermique</term>
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<front><div type="abstract" xml:lang="en"><p><b>PREMISE OF THE STUDY</b>
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<p>Microsatellite markers within regulators of heat stress transcription factors were identified in the Populus trichocarpa genome, and then developed for P. simonii to investigate the genetic diversity of germplasm resources and to further identify favorable alleles significantly associated with stress-resistant traits.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>METHODS AND RESULTS</b>
</p>
<p>Thirty-five novel microsatellite markers were identified from genes controlling heat stress transcription factors in P. simonii using a Sanger sequencing protocol. Polymorphisms in 48 individuals from 16 populations of P. simonii revealed that the number of alleles per locus ranged from two to nine with an average of 4.6; the observed heterozygosity and expected heterozygosity per locus varied from 0.143 to 0.857 and from 0.257 to 0.948, respectively.</p>
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<div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b>
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<p>The new polymorphic markers developed during this study will facilitate the construction of genetic linkage maps and will aid in marker-assisted breeding of a new germplasm with desirable abiotic stress resistance in Populus species.</p>
</div>
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Development of 35 microsatellite markers from heat stress transcription factors in Populus simonii (Salicaceae).

Development of 35 microsatellite markers from heat stress transcription factors in Populus simonii (Salicaceae).

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki